STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93364.1Hypothetical protein. (152 aa)    
Predicted Functional Partners:
ALP94486.1
Hypothetical protein.
  
     0.654
ALP93239.1
Hypothetical protein.
  
     0.646
ALP92422.1
Hypothetical protein.
  
     0.632
ALP94464.1
Hypothetical protein.
  
     0.600
ALP92612.1
DNA replication protein dnaD.
 
     0.597
ALP94564.1
Hypothetical protein.
 
     0.591
ALP94374.1
Hypothetical protein.
  
     0.588
ALP95007.1
Hypothetical protein; Similar to (EMBL:AL117211) YPMT1.20C.
  
     0.587
ALP93219.1
Hypothetical protein.
  
     0.569
ALP94023.1
LysM domain-containing membrane protein.
  
     0.568
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.