STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93372.13,5-diaminobexanoate dehydrogenase. (346 aa)    
Predicted Functional Partners:
ALP93374.1
L-beta-lysine 5,6-aminomutase alpha subunit.
 
  
 0.989
ALP93375.1
L-beta-lysine 5,6-aminomutase beta subunit.
 
  
 0.989
ALP93370.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.966
ALP92690.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.929
ALP95583.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.924
ALP95372.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.921
ALP94733.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.919
ALP95596.1
3-keto-5-aminohexanoate cleavage enzyme.
 
  
 0.919
ALP94816.1
Hypothetical protein.
 
  
 0.918
ALP92676.1
Sigma-54-dependent transcriptional activator.
 
    0.886
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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