STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93489.1Hypothetical protein. (470 aa)    
Predicted Functional Partners:
ALP93484.1
Primosomal protein N' (replication factor Y) - superfamily II helicase.
 
  
 0.933
ALP93483.1
Protein of unknown function DUF477.
 
  
 0.931
ALP93488.1
Hypothetical protein.
      
0.773
ALP93496.1
Hypothetical protein.
 
     0.705
ALP93495.1
Hypothetical protein.
 
     0.643
ALP93486.1
Hypothetical protein.
       0.620
ALP93487.1
Hypothetical protein.
       0.620
ALP93485.1
Hypothetical protein.
       0.535
ALP93055.1
Beta-propeller domains of methanol dehydrogenase type.
  
  
 0.491
ALP93490.1
Hypothetical protein.
       0.467
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.