STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93580.1Zinc ABC transporter, periplasmic-binding protein ZnuA; Belongs to the bacterial solute-binding protein 9 family. (323 aa)    
Predicted Functional Partners:
ALP93629.1
Zinc ABC transporter, periplasmic-binding protein ZnuA.
 
 0.998
ALP93578.1
ABC transporter 3.
 
 
 0.995
ALP93579.1
ABC transporter.
 
 
 0.995
ALP93631.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
 
 
 0.980
ALP93630.1
Zinc ABC transporter, ATP-binding protein ZnuC.
 
 
 0.971
ALP93577.1
Hypothetical protein.
  
  
 0.776
rpsZ
SSU ribosomal protein S14p (S29e); Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.565
rpmB
LSU ribosomal protein L28p; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.554
ALP92665.1
Phosphoribosylformylglycinamidine synthase, synthetase subunit.
     
 0.544
ALP93581.1
Hypothetical protein.
       0.515
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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