STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93710.1Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltRNA. (222 aa)    
Predicted Functional Partners:
ALP93711.1
Sensor histidine kinase.
   0.966
ALP93195.1
Sensor histidine kinase.
   0.855
ALP95036.1
Phosphate regulon sensor protein PhoR (SphS).
   0.848
ALP93053.1
Hypothetical protein.
   0.847
ALP93840.1
Sensor histidine kinase.
   0.847
ALP94983.1
Phosphate regulon sensor protein PhoR (SphS).
 
 0.823
ALP94850.1
Two-component hybrid sensor and regulator.
 
   0.820
ALP95501.1
Hypothetical protein.
   0.818
ALP93542.1
Sensor histidine kinase.
   0.815
ALP94690.1
Hypothetical protein.
   0.812
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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