STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93727.1Substrate-specific component CbrT of predicted cobalamin ECF transporter. (158 aa)    
Predicted Functional Partners:
ALP93726.1
Hypothetical protein.
       0.747
ALP93199.1
Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter.
  
 
 0.621
ALP93665.1
Transmembrane component of energizing module of predicted ECF transporter.
  
 
 0.621
ALP93672.1
Transmembrane component of energizing module of predicted ECF transporter.
  
 
 0.621
ALP93915.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
  
 
 0.621
ecfT
Transmembrane component of ECF transporter; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
  
 
 0.621
ALP93725.1
Spore coat F-containing protein.
       0.535
ALP93724.1
Hypothetical protein.
       0.518
ALP92832.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
  
 0.507
ALP94361.1
8-oxo-dGTPase Bsu YtkD / 8-oxo-GTPase Bsu YtkD; Belongs to the Nudix hydrolase family.
  
     0.493
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.