STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93734.1Hypothetical protein. (254 aa)    
Predicted Functional Partners:
ALP93732.1
ABC-type multidrug transport system.
  
 
 0.910
ALP93735.1
Sensor histidine kinase.
  
    0.764
ALP93733.1
Hypothetical protein.
      
0.737
ALP92772.1
ABC transporter, ATP-binding protein.
  
 
 0.652
ALP93712.1
ABC-type multidrug transport system, ATPase component.
  
 
 0.652
ALP94353.1
ABC Transporter, ATP-binding protein.
  
 
 0.652
ALP95718.1
ABC transporter, ATP-binding protein.
  
 
 0.652
ALP93730.1
Fibronectin/fibrinogen-binding protein.
  
    0.540
mrnC
Small protein similar to cysteinyl-tRNA synthetase; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.
       0.524
ALP93731.1
Two-component response regulator.
       0.524
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.