STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93765.1Vitamin B12 ABC transporter, B12-binding component BtuF. (340 aa)    
Predicted Functional Partners:
ALP93763.1
Vitamin B12 ABC transporter, permease component BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.976
ALP93762.1
ABC transporter (iron B12 siderophore hemin), ATP-binding component.
 
 
 0.975
ALP92936.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.934
ALP94288.1
Heme transporter IsdDEF, permease component IsdF; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.924
ALP92937.1
ABC transporter (iron B12 siderophore hemin), ATP-binding component.
 
 
 0.921
ALP94287.1
Heme transporter analogous to IsdDEF, ATP-binding protein.
 
 
 0.895
ALP93767.1
Nitrogenase subunit NifH like, type 1; Belongs to the NifH/BchL/ChlL family.
     
 0.672
ALP93768.1
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE.
       0.646
ALP93769.1
Hypothetical protein.
       0.646
ALP93764.1
ABC transporter (iron B12 siderophore hemin), periplasmic substrate-binding component.
 
    
0.637
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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