STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93798.14-carboxymuconolactone decarboxylase. (281 aa)    
Predicted Functional Partners:
ALP95123.1
4-carboxymuconolactone decarboxylase.
  
 0.989
ALP93149.1
4-carboxymuconolactone decarboxylase.
   
 0.945
ALP93799.1
Flavodoxin.
 
     0.815
ALP93803.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.604
ALP93801.1
Flavodoxin.
 
     0.545
ALP93802.1
Hypothetical protein.
 
     0.536
ALP93800.1
Flavoredoxin.
     
 0.486
ALP94218.1
Hypothetical protein.
  
    0.464
ALP93219.1
Hypothetical protein.
  
    0.403
ALP94979.1
Iron-sulfur flavoprotein.
 
     0.402
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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