STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93816.1Ethanolamine two-component response regulator. (179 aa)    
Predicted Functional Partners:
ALP93815.1
Glutamine synthetase type I.
 
  
 0.769
ALP93707.1
Hypothetical protein; FIG00521570.
  
   
 0.659
ALP92671.1
High-affinity leucine-specific transport system, periplasmic binding protein LivK; TC 3.A.1.4.1.
  
 
 0.652
ALP95586.1
Branched-chain amino acid ABC transporter, amino acid-binding protein; TC 3.A.1.4.1.
  
 
 0.652
ALP93819.1
Glutamate synthase large chain.
  
  
 0.639
ALP93048.1
Ammonium transporter; Belongs to the P(II) protein family.
  
  
 0.614
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
       0.611
ALP94442.1
Hypothetical protein.
 
     0.591
dapL
L,L-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.
       0.575
ALP93767.1
Nitrogenase subunit NifH like, type 1; Belongs to the NifH/BchL/ChlL family.
   
  
 0.547
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.