STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93834.1Hypothetical protein; Belongs to the 'phage' integrase family. (280 aa)    
Predicted Functional Partners:
ALP93831.1
Hypothetical protein.
 
     0.525
ALP93833.1
Hypothetical protein.
       0.510
ALP95110.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
  
 0.503
ALP93832.1
Hypothetical protein.
       0.461
ALP92921.1
Hypothetical protein.
   
    0.455
ALP94994.1
Arogenate dehydrogenase.
  
    0.442
ALP95159.1
Hypothetical protein.
  
    0.437
ALP92827.1
Cytochrome c-type biogenesis protein CcdA (DsbD like) / Cytochrome c-type biogenesis protein ResA.
 
  
 0.433
whiA
Cytoplasmic hypothetical protein DUF199, a subgroup; Involved in cell division and chromosome segregation.
   
    0.420
ALP93157.1
Hypothetical protein; Belongs to the 'phage' integrase family.
  
  
 0.418
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.