STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93838.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
ALP93837.1
Hypothetical protein.
 
    0.985
ALP93836.1
Hypothetical protein.
 
     0.915
ALP93840.1
Sensor histidine kinase.
 
    0.700
ALP95078.1
Putative cation-transporting ATPase.
  
 
 0.660
ALP95704.1
Cation-transporting ATPase, E1-E2 family.
  
 
 0.660
ALP93839.1
Regulation of D-alanyl-lipoteichoic acid biosynthesis, DltRNA.
  
 
 0.605
ALP93835.1
Hypothetical protein.
       0.530
ALP93410.1
Hypothetical protein.
 
   
 0.480
ALP94212.1
Sensory box/GGDEF family protein.
  
 
 0.469
cinA
Competence/damage-inducible protein CinA; Belongs to the CinA family.
  
  
 0.459
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.