STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93859.1Putative CoA-transferase; Belongs to the CoA-transferase III family. (412 aa)    
Predicted Functional Partners:
ALP93858.1
Butyryl-CoA dehydrogenase.
 
 
 0.747
ALP93860.1
D-beta-hydroxybutyrate permease.
       0.523
ALP95534.1
Benzoyl-CoA reductase subunit BadD.
 
   
 0.523
ALP94774.1
Benzoyl-CoA reductase subunit BadE.
 
     0.470
ALP93861.1
3-hydroxybutyryl-CoA dehydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.453
ALP93857.1
Transcriptional regulator.
       0.447
ALP94773.1
Benzoyl-CoA reductase subunit BadD.
 
   
 0.442
ALP94964.1
Benzoyl-CoA reductase subunit BadD.
 
   
 0.435
ALP94963.1
Benzoyl-CoA reductase subunit BadE.
 
     0.432
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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