STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP93955.1Spermidine Putrescine ABC transporter permease component PotB; TC 3.A.1.11.1. (269 aa)    
Predicted Functional Partners:
ALP93954.1
Spermidine Putrescine ABC transporter permease component potC; TC 3.A.1.11.1.
 
0.998
potA-2
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.997
ALP93953.1
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TC 3.A.1.11.1.
 
 0.995
ALP93347.1
Spermidine Putrescine ABC transporter permease component potC; TC 3.A.1.11.1.
 
0.994
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 0.986
ALP93346.1
Spermidine Putrescine ABC transporter permease component potD; TC 3.A.1.11.1.
 
 0.982
ALP93348.1
Spermidine Putrescine ABC transporter permease component PotB; TC 3.A.1.11.1.
  
  
 
0.913
ALP93957.1
Hypothetical protein.
       0.491
ALP93951.1
tRNA proofreading protein.
       0.471
ALP93952.1
Hypothetical protein.
       0.471
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.