Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ALP92730.1 | ALP92921.1 | IB211_00334 | IB211_00526c | MG(2+) chelatase. | Hypothetical protein. | 0.815 |
ALP92730.1 | ALP93975.1 | IB211_00334 | IB211_01584 | MG(2+) chelatase. | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | 0.802 |
ALP92730.1 | ALP94212.1 | IB211_00334 | IB211_01821c | MG(2+) chelatase. | Sensory box/GGDEF family protein. | 0.510 |
ALP92730.1 | ALP94591.1 | IB211_00334 | IB211_02200c | MG(2+) chelatase. | Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. | 0.912 |
ALP92921.1 | ALP92730.1 | IB211_00526c | IB211_00334 | Hypothetical protein. | MG(2+) chelatase. | 0.815 |
ALP92921.1 | ALP93975.1 | IB211_00526c | IB211_01584 | Hypothetical protein. | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | 0.630 |
ALP92921.1 | ALP94212.1 | IB211_00526c | IB211_01821c | Hypothetical protein. | Sensory box/GGDEF family protein. | 0.906 |
ALP92921.1 | ALP94591.1 | IB211_00526c | IB211_02200c | Hypothetical protein. | Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. | 0.870 |
ALP93973.1 | ALP93975.1 | IB211_01582 | IB211_01584 | 50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | 0.828 |
ALP93973.1 | ALP93976.1 | IB211_01582 | IB211_01585 | 50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Hypothetical protein. | 0.828 |
ALP93973.1 | ALP93977.1 | IB211_01582 | IB211_01586 | 50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Threonine synthase. | 0.828 |
ALP93973.1 | ALP93978.1 | IB211_01582 | IB211_01587 | 50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ser/Thr protein phosphatase family protein. | 0.675 |
ALP93973.1 | rnhB | IB211_01582 | IB211_01583 | 50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.911 |
ALP93975.1 | ALP92730.1 | IB211_01584 | IB211_00334 | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | MG(2+) chelatase. | 0.802 |
ALP93975.1 | ALP92921.1 | IB211_01584 | IB211_00526c | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | Hypothetical protein. | 0.630 |
ALP93975.1 | ALP93973.1 | IB211_01584 | IB211_01582 | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | 50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.828 |
ALP93975.1 | ALP93976.1 | IB211_01584 | IB211_01585 | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | Hypothetical protein. | 0.828 |
ALP93975.1 | ALP93977.1 | IB211_01584 | IB211_01586 | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | Threonine synthase. | 0.828 |
ALP93975.1 | ALP93978.1 | IB211_01584 | IB211_01587 | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | Ser/Thr protein phosphatase family protein. | 0.675 |
ALP93975.1 | ALP94212.1 | IB211_01584 | IB211_01821c | Protein of unknown function UPF0102; Belongs to the UPF0102 family. | Sensory box/GGDEF family protein. | 0.559 |
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