STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94191.1Iron-dependent repressor. (132 aa)    
Predicted Functional Partners:
ALP94545.1
Mn-dependent transcriptional regulator MntRNA.
  
     0.714
ALP94295.1
Hypothetical protein.
  
     0.651
ALP94192.1
Hypothetical protein.
 
  
 0.586
ALP92742.1
tRNA (Guanine37-N1) -methyltransferase.
 
      0.543
ALP94190.1
Hypothetical protein.
 
     0.524
ALP94188.1
Iron-dependent repressor IdeR/DtxR.
 
    
0.497
ALP94193.1
Ferrous iron transport protein A.
  
  
 0.473
metN
Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.466
ALP94187.1
Metal transporter, ZIP family.
  
  
 0.463
ALP94189.1
Flavodoxin.
 
     0.442
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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