STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94209.1Putative DH dehydrogenase/D(P)H nitroreductase. (197 aa)    
Predicted Functional Partners:
ALP94210.1
Hypothetical protein.
       0.655
birA
Biotin operon repressor / Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.542
ALP94354.1
Hypothetical protein.
  
  
 0.522
ALP93301.1
Long-chain-fatty-acid--CoA ligase.
   
 
 0.520
ALP93223.1
Lactoylglutathione lyase.
  
    0.487
ALP95638.1
Oxygen-insensitive DPH nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
     0.485
ALP95359.1
Oxygen-insensitive DPH nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
     0.476
ALP94208.1
Glutamine-hydrolyzing GMP synthase.
     
 0.464
ALP95558.1
DPH nitroreductase.
  
     0.421
tadA
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.414
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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