STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94252.1Dipeptide transport system permease protein DppB; TC 3.A.1.5.2. (314 aa)    
Predicted Functional Partners:
ALP94253.1
Dipeptide transport system permease protein DppC; TC 3.A.1.5.2.
  
 0.980
ALP94254.1
Oligopeptide transport ATP-binding protein OppD; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 0.933
ALP94251.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA; TC 3.A.1.5.1.
 
 0.919
ALP94255.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
 
 0.895
ALP94102.1
Dipeptide transport system permease protein DppC; TC 3.A.1.5.2.
  
 0.894
ALP92477.1
Nickel transport system permease protein NikC; TC 3.A.1.5.3.
  
 0.892
ALP93522.1
Dipeptide transport system permease protein DppC; TC 3.A.1.5.2.
  
 0.887
ALP94740.1
Dipeptide-binding ABC transporter, periplasmic substrate-binding component; TC 3.A.1.5.2.
 
 0.882
ALP94825.1
Dipeptide transport system permease protein DppC; TC 3.A.1.5.2.
  
 0.881
ALP95673.1
Dipeptide transport system permease protein DppC; TC 3.A.1.5.2.
  
 0.879
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.