STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94265.1Hypothetical protein; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
ALP92999.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.770
ALP93843.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.770
ALP94769.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.766
ALP94220.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.764
ALP95376.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.756
ALP94925.1
LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family.
  
     0.754
ALP95354.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.751
ALP92480.1
Transcriptional regulator ligR, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.650
ALP94926.1
LysR family regulatory protein CidR.
  
     0.597
ALP93803.1
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.585
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.