STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94300.1Lipid A export ATP-binding/permease protein MsbA. (583 aa)    
Predicted Functional Partners:
ALP94298.1
Transcriptional regulator, TetRNA family.
 
     0.882
ALP94299.1
ABC transporter ATP-binding protein.
 
    
0.781
ALP92486.1
Transcriptional regulator, TetRNA family.
  
     0.751
ALP94855.1
Hypothetical protein.
  
     0.727
ALP93216.1
Cell division transporter, ATP-binding protein FtsE; TC 3.A.5.1.1.
     
0.690
ALP95671.1
Oligopeptide transport ATP-binding protein OppF; TC 3.A.1.5.1; Belongs to the ABC transporter superfamily.
     
0.663
ALP95006.1
AAA ATPase, central region.
   
 0.549
ALP93663.1
Transcriptional regulator, TetRNA family.
  
     0.511
ALP95285.1
Glutamate transport ATP-binding protein.
     
0.414
ALP95524.1
CoA-disulfide reductase.
  
 
 0.413
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.