STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94308.1Hypothetical protein. (624 aa)    
Predicted Functional Partners:
ALP94315.1
Hypothetical protein.
 
     0.928
ALP94319.1
ThiF family protein, ubiquitin-activating enzyme.
 
 
 0.887
ALP94307.1
DNA primase.
 
    0.880
ALP94349.1
DNA/RNA helicase; Superfamily II, SNF2 family.
 
 
 
 0.813
ALP94309.1
Hypothetical protein.
       0.773
ALP94310.1
Hypothetical protein.
       0.768
ALP94311.1
Hypothetical protein.
       0.762
ALP94312.1
Hypothetical protein.
       0.757
ALP93989.1
Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
 
 0.756
ALP94313.1
Hypothetical protein.
       0.740
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.