STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94315.1Hypothetical protein. (471 aa)    
Predicted Functional Partners:
ALP94308.1
Hypothetical protein.
 
     0.928
ALP94319.1
ThiF family protein, ubiquitin-activating enzyme.
 
     0.878
ALP94349.1
DNA/RNA helicase; Superfamily II, SNF2 family.
     0.794
ALP94314.1
Plasmid protein.
       0.769
ALP94307.1
DNA primase.
 
     0.752
ALP94313.1
Hypothetical protein.
       0.741
ALP94311.1
Hypothetical protein.
       0.736
ALP94312.1
Hypothetical protein.
       0.727
ALP94310.1
Hypothetical protein.
       0.715
ALP94309.1
Hypothetical protein.
       0.709
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.