STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94400.1Propanediol utilization polyhedral body protein PduB. (269 aa)    
Predicted Functional Partners:
ALP94399.1
Propanediol dehydratase large subunit.
 
  
 0.980
ALP94398.1
Propanediol dehydratase medium subunit.
 
  
 0.974
ALP94397.1
Propanediol dehydratase small subunit.
 
  
 0.970
ALP94395.1
Propanediol dehydratase reactivation factor small subunit.
 
  
 0.965
ALP94396.1
Propanediol dehydratase reactivation factor large subunit.
 
  
 0.936
ALP94391.1
Ethanolamine utilization protein EutJ.
 
  
 0.930
ALP94388.1
Cob(I)alamin adenosyltransferase PduO; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.909
ALP94404.1
Methyl-accepting chemotaxis protein.
 
  
 0.861
ALP94387.1
CoA-acylating propionaldehyde dehydrogenase.
 
  
 0.847
ALP94394.1
Propanediol utilization polyhedral body protein PduA.
 
  
 0.808
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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