STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94404.1Methyl-accepting chemotaxis protein. (407 aa)    
Predicted Functional Partners:
ALP94403.1
D-binding response regulator, AraC family.
  
 0.945
ALP94400.1
Propanediol utilization polyhedral body protein PduB.
 
  
 0.861
ALP94388.1
Cob(I)alamin adenosyltransferase PduO; Belongs to the Cob(I)alamin adenosyltransferase family.
 
  
 0.842
ALP94395.1
Propanediol dehydratase reactivation factor small subunit.
 
     0.841
ALP94397.1
Propanediol dehydratase small subunit.
 
   
 0.819
ALP94398.1
Propanediol dehydratase medium subunit.
 
   
 0.815
ALP94385.1
Hypothetical protein.
 
     0.806
ALP94399.1
Propanediol dehydratase large subunit.
 
   
 0.788
ALP94405.1
5-methylthioribose kinase.
 
     0.775
ALP94396.1
Propanediol dehydratase reactivation factor large subunit.
 
     0.718
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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