STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94562.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
ALP94564.1
Hypothetical protein.
 
    
0.791
ALP94563.1
Ribosomal-protein-S18p-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.785
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.
   
 
 0.712
ALP95334.1
Hypothetical protein.
  
     0.622
ALP93055.1
Beta-propeller domains of methanol dehydrogenase type.
 
     0.589
ALP94486.1
Hypothetical protein.
  
     0.575
ALP93057.1
Hypothetical protein.
  
     0.556
ALP93364.1
Hypothetical protein.
 
     0.554
ALP93512.1
Hypothetical protein.
   
    0.493
ALP94503.1
Glycosyltransferase.
 
 
 
 0.481
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.