Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ALP92728.1 | ALP93819.1 | IB211_00332c | IB211_01426 | Pyruvate-flavodoxin oxidoreductase. | Glutamate synthase large chain. | 0.719 |
| ALP92728.1 | ALP94591.1 | IB211_00332c | IB211_02200c | Pyruvate-flavodoxin oxidoreductase. | Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. | 0.417 |
| ALP92728.1 | leuS | IB211_00332c | IB211_02258c | Pyruvate-flavodoxin oxidoreductase. | Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.756 |
| ALP92728.1 | polA | IB211_00332c | IB211_02174c | Pyruvate-flavodoxin oxidoreductase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.416 |
| ALP92728.1 | topA | IB211_00332c | IB211_02199c | Pyruvate-flavodoxin oxidoreductase. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.969 |
| ALP93819.1 | ALP92728.1 | IB211_01426 | IB211_00332c | Glutamate synthase large chain. | Pyruvate-flavodoxin oxidoreductase. | 0.719 |
| ALP93819.1 | ALP94329.1 | IB211_01426 | IB211_01938c | Glutamate synthase large chain. | Single-stranded D-binding protein. | 0.444 |
| ALP93819.1 | ALP95150.1 | IB211_01426 | IB211_02759 | Glutamate synthase large chain. | Single-stranded D-binding protein. | 0.444 |
| ALP93819.1 | ALP95269.1 | IB211_01426 | IB211_02878c | Glutamate synthase large chain. | Single-stranded D-binding protein. | 0.444 |
| ALP93819.1 | polA | IB211_01426 | IB211_02174c | Glutamate synthase large chain. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.564 |
| ALP93819.1 | rpoA | IB211_01426 | IB211_03016c | Glutamate synthase large chain. | D-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.477 |
| ALP93819.1 | topA | IB211_01426 | IB211_02199c | Glutamate synthase large chain. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.866 |
| ALP94329.1 | ALP93819.1 | IB211_01938c | IB211_01426 | Single-stranded D-binding protein. | Glutamate synthase large chain. | 0.444 |
| ALP94329.1 | ALP94591.1 | IB211_01938c | IB211_02200c | Single-stranded D-binding protein. | Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. | 0.543 |
| ALP94329.1 | ALP95150.1 | IB211_01938c | IB211_02759 | Single-stranded D-binding protein. | Single-stranded D-binding protein. | 0.914 |
| ALP94329.1 | ALP95269.1 | IB211_01938c | IB211_02878c | Single-stranded D-binding protein. | Single-stranded D-binding protein. | 0.906 |
| ALP94329.1 | polA | IB211_01938c | IB211_02174c | Single-stranded D-binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.572 |
| ALP94329.1 | rpoA | IB211_01938c | IB211_03016c | Single-stranded D-binding protein. | D-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.413 |
| ALP94329.1 | topA | IB211_01938c | IB211_02199c | Single-stranded D-binding protein. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.832 |
| ALP94591.1 | ALP92728.1 | IB211_02200c | IB211_00332c | Rossmann fold nucleotide-binding protein Smf; Possibly involved in DNA uptake. | Pyruvate-flavodoxin oxidoreductase. | 0.417 |
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