STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94695.1Sugar ABC transporter, ATP-binding protein. (513 aa)    
Predicted Functional Partners:
ALP94694.1
ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
ALP94693.1
Unspecified monosaccharide ABC transport system, permease component 2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.995
ALP95747.1
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.986
ALP95746.1
Putative deoxyribose-specific ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.981
ALP94140.1
Bmp family protein.
 
 
 0.979
ALP95749.1
Hypothetical protein.
 
 
 0.951
ALP95748.1
Putative deoxyribose-specific ABC transporter, ATP-binding protein.
  
  
 
0.910
ALP94679.1
Galactose/methyl galactoside ABC transport system, permease protein MglC; TC 3.A.1.2.3; Belongs to the binding-protein-dependent transport system permease family.
 
     0.682
nagB
Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
       0.451
ALP94696.1
Hypothetical protein.
       0.436
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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