STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94749.1D-binding response regulator, LuxR family. (200 aa)    
Predicted Functional Partners:
ALP94748.1
Hypothetical protein.
   
 0.954
ALP94754.1
Ethanolamine sensory transduction histidine kinase.
   
 0.890
ALP94753.1
Ethanolamine utilization protein EutA.
 
   
 0.733
ALP94750.1
Ethanolamine utilization polyhedral-body-like protein EutL.
 
   
 0.722
ALP94243.1
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
  
   
 0.707
ALP93053.1
Hypothetical protein.
  
    0.690
ALP94242.1
Sensor histidine kinase.
  
    0.653
ALP92671.1
High-affinity leucine-specific transport system, periplasmic binding protein LivK; TC 3.A.1.4.1.
  
 
 0.652
ALP95586.1
Branched-chain amino acid ABC transporter, amino acid-binding protein; TC 3.A.1.4.1.
  
 
 0.652
eutC-2
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
 
   
 0.641
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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