STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94771.1TRAP-type uncharacterized transport system, fused permease component. (628 aa)    
Predicted Functional Partners:
ALP94772.1
TRAP transporter solute receptor, TAXI family precursor.
 
    0.945
ALP95572.1
TRAP transporter solute receptor, TAXI family precursor.
    0.839
ALP92687.1
TRAP transporter solute receptor, TAXI family precursor.
 
    0.826
ALP93003.1
TRAP transporter solute receptor, TAXI family precursor.
 
    0.826
ALP92848.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
  
     0.669
ALP94770.1
Iron-sulfur cluster binding protein.
       0.542
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.