STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94880.1Hypothetical protein. (823 aa)    
Predicted Functional Partners:
ALP92479.1
Nickel ABC transporter, periplasmic nickel-binding protein NikA; TC 3.A.1.5.3.
  
     0.580
ALP94536.1
Hypothetical protein.
 
     0.573
ALP94879.1
Hypothetical protein.
       0.536
ALP92475.1
Nickel transport ATP-binding protein NikE; TC 3.A.1.5.3.
  
     0.496
ALP94881.1
Hypothetical protein.
       0.486
ALP94878.1
Hypothetical protein.
       0.480
ALP93150.1
Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
    
 
 0.474
ALP95474.1
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.474
ALP92480.1
Transcriptional regulator ligR, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.450
ALP94877.1
Hypothetical protein.
       0.450
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.