STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94885.1Hypothetical protein. (1032 aa)    
Predicted Functional Partners:
ALP94886.1
RNA polymerase sigma-54 factor RpoN.
       0.773
ALP94229.1
Hypothetical protein.
  
     0.758
ALP95510.1
Hypothetical protein.
  
     0.749
ALP93624.1
Sensor histidine kinase.
 
   
 0.710
ALP93647.1
Membrane associated protein.
 
     0.707
ALP94360.1
Hypothetical protein.
 
     0.687
ALP95497.1
Peptidoglycan N-acetylglucosamine deacetylase.
  
     0.641
ALP93672.1
Transmembrane component of energizing module of predicted ECF transporter.
  
     0.507
ALP95496.1
Tyrosine-protein kinase EpsD.
  
     0.499
ALP93605.1
Hypothetical protein.
  
     0.479
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.