STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94927.14-hydroxybutyrate coenzyme A transferase. (69 aa)    
Predicted Functional Partners:
ALP94928.1
4-hydroxybutyrate coenzyme A transferase.
      0.834
ALP94929.1
Alpha/beta hydrolase fold.
   
 
 0.600
ALP92988.1
Methylmalonyl-CoA mutase.
  
  
 0.511
ALP92989.1
Methylmalonyl-CoA mutase.
  
  
 0.511
ALP92749.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 
 0.417
ALP95081.1
Citrate synthase (si); Belongs to the citrate synthase family.
  
 
 0.417
ALP94925.1
LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family.
       0.414
ALP94926.1
LysR family regulatory protein CidR.
       0.414
ALP92728.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.406
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
    0.402
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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