STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP94996.1Spore maturation protein B. (177 aa)    
Predicted Functional Partners:
ALP94997.1
Spore maturation protein A.
  
 0.999
ALP93391.1
Membrane protein.
 
  
 0.658
ALP94024.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.654
ALP94097.1
Stage III sporulation protein AA.
  
  
 0.635
ALP94096.1
Stage III sporulation protein AB.
  
  
 0.553
ALP95324.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.550
ALP93993.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.541
ALP94986.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 0.541
ALP94998.1
Transition state regulatory protein AbrB.
       0.539
gpr
Endopeptidase spore protease Gpr; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
   
 0.502
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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