STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95043.1Phosphoglycolate phosphatase. (216 aa)    
Predicted Functional Partners:
ALP94035.1
Phosphoglycolate phosphatase.
  
  
 
0.928
ALP94915.1
(S)-2-hydroxy-acid oxidase chain D.
    
 0.916
ALP95716.1
HAD-superfamily hydrolase, subfamily IA, variant 3.
 
  
 0.651
ALP95044.1
RNA polymerase sigma-54 factor RpoN.
       0.601
ALP92728.1
Pyruvate-flavodoxin oxidoreductase.
     
 0.561
ALP94112.1
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.539
ALP92665.1
Phosphoribosylformylglycinamidine synthase, synthetase subunit.
  
  
 0.504
ALP95042.1
Phosphate ABC transporter, periplasmic phosphate-binding protein PstS; TC 3.A.1.7.1.
     
 0.484
ALP93059.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.428
tadA
tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
  
    0.428
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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