STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95111.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
ALP95112.1
Iron-sulfur flavoprotein.
 
     0.771
ALP95126.1
Endo-1,4-beta-xylanase A precursor.
 
     0.768
ALP95127.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.738
ALP95115.1
Flavodoxin.
     0.722
ALP95116.1
Flavodoxin.
     0.633
ALP93801.1
Flavodoxin.
      0.576
ALP95113.1
Flavodoxin.
     0.560
ALP95124.1
Flavodoxin.
     0.525
ALP95119.1
Flavoredoxin.
 
   
 0.450
ALP95655.1
Acetyl xylan esterase.
  
     0.449
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.