STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95119.1Flavoredoxin. (184 aa)    
Predicted Functional Partners:
ALP95120.1
Aldo-keto reductase.
  
    0.744
ALP93800.1
Flavoredoxin.
 
    
0.731
ALP95118.1
Oxidoreductase of aldo/keto reductase family, subgroup 1.
  
    0.703
ALP95117.1
Hypothetical protein.
  
  
 0.652
ALP95121.1
Iron-containing alcohol dehydrogenase.
  
    0.627
ALP95126.1
Endo-1,4-beta-xylanase A precursor.
 
     0.596
ALP95116.1
Flavodoxin.
       0.541
ALP95122.1
Iron-sulfur flavoprotein.
       0.537
ALP95123.1
4-carboxymuconolactone decarboxylase.
     
 0.533
ALP95111.1
Hypothetical protein.
 
   
 0.450
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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