STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95124.1Flavodoxin. (509 aa)    
Predicted Functional Partners:
ALP95123.1
4-carboxymuconolactone decarboxylase.
 
  
 0.821
ALP95126.1
Endo-1,4-beta-xylanase A precursor.
 
    
0.801
ALP95125.1
DH-dependent butanol dehydrogenase A.
       0.764
ALP93532.1
Oxidoreductase.
  
 
 0.732
ALP95122.1
Iron-sulfur flavoprotein.
 
    0.684
ALP92789.1
D-reducing hydrogenase subunit HoxF.
   
   0.673
ALP92786.1
D-reducing hydrogenase subunit HoxE.
    
   0.667
ALP95120.1
Aldo-keto reductase.
 
  
 0.666
ALP95117.1
Hypothetical protein.
 
   
 0.647
ALP95127.1
Transcription regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.639
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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