STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95163.1Hypothetical protein; FIG00542958. (128 aa)    
Predicted Functional Partners:
ALP95161.1
Hypothetical protein; FIG00521858.
 
     0.944
ALP95162.1
Hypothetical protein; FIG00514472.
 
     0.941
ALP95166.1
Hypothetical protein; FIG00514266.
 
     0.887
ALP95165.1
Helicase loader DnaI.
 
     0.854
ALP95164.1
Hypothetical protein; FIG00516043.
 
     0.853
ALP95174.1
Hypothetical protein; FIG00521858.
 
     0.753
ALP95175.1
Hypothetical protein; FIG00514472.
 
     0.692
ALP95179.1
Hypothetical protein; FIG00514472.
 
     0.677
ALP93115.1
Hypothetical protein; FIG00527453.
  
     0.655
ALP95182.1
Putative replication initiation protein.
 
     0.643
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.