STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95211.1Bacteriocin-like protein. (241 aa)    
Predicted Functional Partners:
ALP95212.1
Hypothetical protein; FIG00514334.
 
     0.949
ALP95216.1
Hypothetical protein; FIG01020325.
 
     0.939
ALP95213.1
NLP/P60 family protein.
 
     0.936
ALP95209.1
Hypothetical protein.
 
     0.934
ALP95218.1
Hypothetical protein.
 
     0.931
ALP95215.1
TrsE-like protein.
 
     0.928
ALP95214.1
Modification methylase Cfr9I; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.906
ALP95208.1
Hypothetical protein; FIG00530426.
 
     0.890
ALP95210.1
DNA topoisomerase III.
 
     0.886
ALP95217.1
MunI-like protein; Belongs to the MT-A70-like family.
 
     0.882
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.