STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95257.1Glutamate synthase small chain. (978 aa)    
Predicted Functional Partners:
ALP93819.1
Glutamate synthase large chain.
 
 
 0.999
ALP92728.1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.989
ALP92789.1
D-reducing hydrogenase subunit HoxF.
 
 0.987
ALP95282.1
Electron transfer flavoprotein, beta subunit.
  
 
 0.981
ALP92786.1
D-reducing hydrogenase subunit HoxE.
  
 0.976
ALP93532.1
Oxidoreductase.
  
 
 0.965
ALP92497.1
Alkyl hydroperoxide reductase protein F.
  
 
 0.936
ALP95255.1
Xanthine dehydrogenase, molybdenum binding subunit.
 
  
 0.935
ALP93284.1
Thioredoxin reductase.
  
 
 0.918
ALP93439.1
Thioredoxin reductase.
  
 
 0.918
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.