STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95278.1Hypothetical protein. (70 aa)    
Predicted Functional Partners:
ALP95279.1
Radical activating enzyme.
       0.773
ALP93226.1
Hypothetical protein.
 
     0.735
ALP95753.1
HTH-type transcriptional regulator xre.
  
     0.719
ALP94884.1
Defective prophage PBSX negative regulator.
  
     0.695
ALP92571.1
Hypothetical protein.
  
     0.692
ALP93127.1
Hypothetical protein.
  
     0.691
ALP92764.1
Transcriptional regulator, XRE family.
  
     0.671
ALP94560.1
Transcriptional regulator, XRE family.
 
     0.632
ALP94858.1
Hypothetical protein.
  
     0.605
ALP95277.1
Hypothetical protein.
       0.553
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.