STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95379.1Hypothetical protein. (508 aa)    
Predicted Functional Partners:
ALP95400.1
Capsular polysaccharide biosynthesis protein.
  
  
 0.916
ALP94469.1
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.893
ALP95378.1
Hypothetical protein; Related to F420H2-dehydrogenase, beta subunit.
 
     0.887
ALP94785.1
Hypothetical protein; FIG00523537.
  
  
 0.885
ALP94503.1
Glycosyltransferase.
 
  
 0.793
ALP95380.1
Hypothetical protein.
       0.769
ALP95395.1
Undecaprenyl-phosphate galactosephosphotransferase.
  
  
 0.754
ALP94468.1
UDP-galactopyranose mutase.
  
  
 0.733
ALP95009.1
UDP-galactopyranose mutase.
  
  
 0.733
ALP95388.1
Alpha-1,4-N-acetylgalactosamine transferase PglJ.
  
  
 0.723
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.