STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95453.1Iron-sulfur cluster assembly protein SufB. (305 aa)    
Predicted Functional Partners:
ALP95452.1
Iron-sulfur cluster assembly ATPase protein SufC.
 
 
 0.999
ALP93212.1
Iron-sulfur cluster assembly scaffold protein IscU/NifU-like.
  
  
 0.891
ALP95454.1
Hypothetical protein.
 
    0.808
ALP94004.1
Cysteine desulfurase.
  
 
 0.655
ALP94117.1
Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family.
  
 
 0.655
ALP95135.1
Cysteine desulfurase.
  
 
 0.655
ALP95560.1
Cysteine desulfurase.
  
 
 0.655
ALP95455.1
Hypothetical protein.
  
    0.615
ALP94382.1
Alkyl hydroperoxide reductase subunit C-like protein.
  
  
 0.585
ALP95451.1
Hypothetical protein.
     
 0.542
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.