STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95499.1Hypothetical protein. (238 aa)    
Predicted Functional Partners:
ALP95498.1
Manganese-dependent protein-tyrosine phosphatase.
       0.773
ALP95500.1
UDP-N-acetylglucosamine 4,6-dehydratase.
       0.752
ALP95497.1
Peptidoglycan N-acetylglucosamine deacetylase.
       0.741
ALP95495.1
Tyrosine-protein kinase Wzc.
       0.731
ALP95496.1
Tyrosine-protein kinase EpsD.
       0.731
ALP95501.1
Hypothetical protein.
       0.545
ALP95502.1
D-binding response regulator.
       0.545
ALP95494.1
ABC transporter, ATP binding/permease protein.
       0.509
ALP95503.1
Hypothetical protein.
       0.482
ALP95504.1
Hypothetical protein.
       0.473
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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