STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95525.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
ALP95524.1
CoA-disulfide reductase.
  
 
 0.831
ALP95522.1
Butyrate-acetoacetate CoA-transferase subunit B.
       0.773
ALP95523.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
       0.773
ALP95521.1
Transcriptional regulator, GntRNA family.
       0.645
ALP92959.1
Thymidylate synthase.
  
  
 0.604
ALP95526.1
Hypothetical protein.
       0.476
ALP95520.1
Putative MR-MLE-family protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.447
msrA
Peptide methionine sulfoxide reductase MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
     
 0.430
birA
Biotin operon repressor / Biotin-protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
     
 0.426
ALP95518.1
Hypothetical protein.
       0.418
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.