STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95562.1S-adenosylhomocysteine deaminase. (430 aa)    
Predicted Functional Partners:
ALP92797.1
S-adenosylhomocysteine deaminase.
  
  
 
0.927
ALP94500.1
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase.
    
 0.909
ALP95563.1
Polysaccharide deacetylase.
 
   
 0.704
ALP95564.1
Polysaccharide deacetylase.
 
   
 0.704
ALP95561.1
Hypothetical protein.
     
 0.461
ALP92829.1
Beta-lactamase.
  
    0.445
ALP95565.1
Regulator of polyketide synthase expression.
       0.406
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.