STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95639.1Transcriptional regulator, AraC family. (281 aa)    
Predicted Functional Partners:
ALP93286.1
Transcriptional regulator, AraC family.
 
     0.754
ALP95640.1
Glyoxalase family protein.
 
     0.716
ALP94787.1
D-binding response regulator, AraC family.
 
 
 
 0.624
ALP93866.1
Transcriptional regulator, AraC family.
  
   
 0.568
ALP95637.1
Cob(I)alamin adenosyltransferase.
       0.538
ALP95638.1
Oxygen-insensitive DPH nitroreductase; Belongs to the flavin oxidoreductase frp family.
       0.538
ALP95486.1
Putative periplasmic membrane protein.
 
    0.531
ALP95541.1
Transcriptional regulator, AraC family.
  
     0.531
ALP95654.1
Transcriptional regulator, AraC family.
  
     0.527
rpoA
D-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.492
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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