STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95655.1Acetyl xylan esterase. (313 aa)    
Predicted Functional Partners:
nanE
N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).
       0.706
ALP93605.1
Hypothetical protein.
  
     0.638
ALP95650.1
Oxidoreductase.
 
     0.634
ALP94762.1
Hypothetical protein.
  
     0.610
ALP95659.1
N-acetylneuraminate lyase.
 
     0.603
ALP95549.1
TPR-domain containing protein.
  
     0.591
ALP95658.1
Putative beta-D-galactosidase.
 
     0.582
ALP95657.1
ROK family protein (putative glucokinase).
 
     0.556
ALP93172.1
Beta-glucosidase.
 
     0.535
ALP92695.1
Hypothetical protein.
 
     0.529
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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