STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95682.1Putative transcriptional regulator of N-Acetylglucosamine utilization, GntRNA family. (246 aa)    
Predicted Functional Partners:
ALP95521.1
Transcriptional regulator, GntRNA family.
  
    0.701
ALP92853.1
Transcriptional regulator, GntRNA family.
  
    0.699
ALP93360.1
Transcriptional regulator, GntRNA family.
  
    0.671
ALP93072.1
Transcriptional regulator, GntRNA family.
  
    0.640
ALP94799.1
Ribose operon repressor.
  
   
 0.604
ALP95540.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.578
ALP93757.1
Hypothetical protein.
  
   
 0.492
ALP94530.1
Transcriptional regulator yidN, Cro/CI family.
  
  
 0.463
ALP95580.1
Hypothetical protein.
  
   
 0.457
ALP95683.1
Hypothetical protein.
       0.456
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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