STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALP95717.1Hypothetical protein. (648 aa)    
Predicted Functional Partners:
ALP95718.1
ABC transporter, ATP-binding protein.
 
     0.923
ALP95719.1
Transcriptional regulator, GntRNA family.
 
  
 0.883
ALP92574.1
Hypothetical protein.
 
     0.692
ALP92422.1
Hypothetical protein.
  
     0.646
ALP93746.1
Hypothetical protein.
 
     0.640
ALP93218.1
Hypothetical protein.
  
     0.634
ALP94442.1
Hypothetical protein.
 
     0.607
ALP95751.1
Hypothetical protein.
  
     0.574
ALP93309.1
Hypothetical protein.
 
     0.564
ALP93032.1
Hypothetical protein.
  
     0.553
Your Current Organism:
Intestinimonas butyriciproducens
NCBI taxonomy Id: 1297617
Other names: CCUG 63529, Candidatus Clostridium anorexicus, DSM 26588, I. butyriciproducens, Intestinimonas butyriciproducens Klaring et al. 2013, Pseudoflavonifractor sp. 2-1.1, Pseudoflavonifractor sp. SRB-521-5-I, strain SRB-521-5-I
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.